Teacher Details
| 1) | Nikte, S.V., Joshi, M., Sengupta, D. (2024). State-dependent dynamics of extramembrane domains in the β2-adrenergic receptor. Proteins: Structure, Function and Bioinformatics,
92 (3), 1-12.
ISSN(print/online): 0887-3585/1097-0134,
URL/DOI: http://dx.doi.org/10.1002/prot.26613
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| 2) | Joshi, M.S., Lin, S.J., Vona, B., Lau, T., Huang, K., Zaki, M.S., Aldeen, H.S., Karimiani, E.G., Rocca, C., Noureldeen, M.M., Saad, A.K., Petree, C....ed. (2023). Evaluating the association of biallelic OGDHL variants with significant phenotypic heterogeneity. . Genome Medicine,
15 (1), 102.
ISSN(print/online): 1756-994X,
URL/DOI: http://dx.doi.org/10.1186/s13073-023-01258-4
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| 3) | Paithankar, H., Tarang, G.S., Parvez, F., Marathe, A., Joshi, M., Chugh, J. (2022). Inherent conformational plasticity in dsRBDs enables interaction with topologically distinct RNAs. Biophysical Journal,
121 (6), 1038-1055.
ISSN(print/online): 0006-3495/1542-0086,
URL/DOI: http://dx.doi.org/10.1016/j.bpj.2022.02.005
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| 4) | Gujar, N., Nikte, S.V., Joshi, R.S., Joshi, M. (2021). Molecular Characterization of the β2-like Octopamine Receptor of Helicoverpa armigera. Journal of Membrane Biology,
254, 311-319.
ISSN(print/online): 0022-2631/1432-1424,
URL/DOI: http://dx.doi.org/10.1007/s00232-021-00172-3
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| 5) | Alai, S., Gujar, N., Joshi, M., Gautam, M., Gairola, S. (2021). Pan-India novel coronavirus SARS-CoV-2 genomics and global diversity analysis in spike protein. Heliyon,
7 (3), e06564.
ISSN(print/online): 2405-8440,
URL/DOI: http://dx.doi.org/10.1016/j.heliyon.2021.e06564
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| 6) | Borse, S., Joshi, M., Saggam, A., Bhat, V., Walia, S., Marathe, A., Sagar, S., Chavan-Gautam, P., Girme, A., Hingorani, L., Tillu, G. (2021). Ayurveda botanicals in COVID-19 management: An in silico multi-target approach. PloS One,
16 (6), e0248479. Google Scholar Citations,
ISSN(print/online): 1932-6203,
URL/DOI: http://dx.doi.org/10.1371/journal.pone.0248479
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| 7) | Kharche, S., Joshi, M., Chattopadhyay, A., Sengupta, D. (2021). Conformational plasticity and dynamic interactions of the N-terminal domain of the chemokine receptor CXCR1. PLoS Computational Biology,
17 (5), e1008593. Google Scholar Citations,
ISSN(print/online): 1553-7358/1553-734X,
URL/DOI: http://dx.doi.org/10.1371/journal.pcbi.1008593
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| 8) | Nikte, S.V., Sonar, K., Tandale, A., Joshi, M., Sengupta, D. (2021). Loss of a water-mediated network results in reduced agonist affinity in a β2-adrenergic receptor clinical variant. Biochimica et Biophysica Acta- Proteins and Proteomics,
1869 (4), 140605.
ISSN(print/online): 1570-9639/1878-1454,
URL/DOI: http://dx.doi.org/10.1016/j.bbapap.2021.140605
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| 9) | Joshi, M., Lin, S.J., Vona, B., Barbalho, P.G., Kaiyrzhanov, R., Maroofian, R., Petree, C., Severino, M., Stanley, V., Varshney, P., Bahena, P., Alzahrani, F. (2021). Biallelic variants in KARS1 are associated with neurodevelopmental disorders and hearing loss recapitulated by the knockout zebrafish. Genetics in Medicine,
23 (10), 1933-1943.
ISSN(print/online): 1098-3600/1530-0366,
URL/DOI: http://dx.doi.org/10.1038/s41436-021-01239-1
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| 10) | Kulkarni, A.S., Ramesh, R., Walia, S., Sayyad, S.I., Gathalkar, G.B., Balamkundu, S., Joshi, M., Sen, A., Reddy, D.S. (2021). Identification of a Novel Series of Potent Organosilicon Mosquito Repellents. ACS Omega,
6 (46), 31236-31243.
ISSN(print/online): 2470-1343,
URL/DOI: http://dx.doi.org/10.1021/acsomega.1c04961
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| 11) | Nikte, S., Gahankari, A., Mulla, J., Sengupta, D., Joshi, M., Tamhane, V. (2020). In vitro and in silico studies on membrane interactions of diverse Capsicum annuum flower γ-thionin peptides. Proteins: Structure, Function and Bioinformatics,
88 (1), 227-236.
ISSN(print/online): 0887-3585/1097-0134,
URL/DOI: http://dx.doi.org/10.1002/prot.25791
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| 12) | Kumari, J., Bendre, A.D., Bhosale, S., Vinnakota, R., Burada, A.P., Ravelli, R., Peters, P.J., Joshi, M., Kumar, J. (2020). Structural dynamics of the GluK3-kainate receptor neurotransmitter binding domains revealed by cryo-EM. International Journal of Biological Macromolecules,
149, 1051-1058.
ISSN(print/online): 0141-8130/1879-0003,
URL/DOI: http://dx.doi.org/10.1016/j.ijbiomac.2020.01.282
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| 13) | Jamalpure, S., Panditrao, G., Kulabhusan, P.K., Hameed, A.S., Paknikar, K.M., Joshi, M., Rajwade, J.M. (2020). In silico studies on the interaction of phage displayed biorecognition element (TFQAFDLSPFPS) with the structural protein VP28 of white spot syndrome virus. Journal of Molecular Modeling,
26 (10), 264.
ISSN(print/online): 1610-2940/0948-5023,
URL/DOI: http://dx.doi.org/10.1007/s00894-020-04524-z
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| 14) | Palrecha, S., Lakade, D., Kulkarni, A., Pal, J.K., Joshi, M. (2019). Computational insights into the interaction of small molecule inhibitors with HRI kinase domain. Journal of Biomolecular Structure and Dynamics,
37 (7), 1715-1723. Google Scholar Citations,
ISSN(print/online): 0739-1102/1538-0254,
URL/DOI: http://dx.doi.org/10.1080/07391102.2018.1465850
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| 15) | Bhosale, S., Nikte, S.V., Sengupta, D., Joshi, M. (2019). Differential Dynamics Underlying the Gln27Glu Population Variant of the β2-Adrenergic. Journal of Membrane Biology,
252, 499–507. Google Scholar Citations,
ISSN(print/online): 0022-2631/1432-1424,
URL/DOI: http://dx.doi.org/10.1007/s00232-019-00093-2
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| 16) | Kharche, S., Joshi, M., Sengupta, D., Chattopadhyay, A. (2018). Membrane-induced organization and dynamics of the N-terminal domain of chemokine receptor CXCR1: insights from atomistic simulations. Chemistry and Physics of Lipids,
210, 142-148.
ISSN(print/online): 0009-3084/1873-2941,
URL/DOI: http://dx.doi.org/10.1016/j.chemphyslip.2017.09.003
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| 17) | Barage, S., Kulkarni, A., Pal, J.K., Joshi, M. (2017). Unravelling the structural interactions between PKR kinase domain and its small molecule inhibitors using computational approaches. Journal of Molecular Graphics and Modelling,
75, 322-329.
ISSN(print/online): 1093-3263/1873-4243,
URL/DOI: http://dx.doi.org/10.1016/j.jmgm.2017.06.009
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| 18) | Tandale, A., Joshi, M., Sengupta, D. (2016). Structural insights and functional implications of inter-individual variability in beta(2)-adrenergic receptor. Scientific Reports,
6, 24379. Google Scholar Citations,
ISSN(print/online): 2045-2322,
URL/DOI: http://dx.doi.org/10.1038/srep24379
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| 19) | Agrawal, S., Kulabhusan, P.K., Joshi, M., Bodas, D., Paknikar, K.M. (2016). A high affinity phage-displayed peptide as a recognition probe for the detection of Salmonella Typhimurium. Journal of Biotechnology,
231, 40-45. Google Scholar Citations,
ISSN(print/online): 0168-1656/1873-4863,
URL/DOI: http://dx.doi.org/10.1016/j.jbiotec.2016.05.027
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| 20) | Joshi, M., Rajpathak, S.N., Narwade, S.C., Deobagkar, D. (2016). Ensemble-Based Virtual Screening and Experimental Validation of Inhibitors Targeting a Novel Site of Human DNMT1. Chemical Biology and Drug Design,
88 (1), 5-16. Google Scholar Citations,
ISSN(print/online): 1747-0277/1747-0285,
URL/DOI: http://dx.doi.org/10.1111/cbdd.12741
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| 21) | Shahane, G., Parsania, C., Sengupta, D., Joshi, M. (2014). Molecular insights into the dynamics of pharmacogenetically important N-terminal variants of the human β2-adrenergic receptor. PLoS Computational Biology,
10 (12), e1004006. Google Scholar Citations,
ISSN(print/online): 1553-7358/1553-734X,
URL/DOI: http://dx.doi.org/10.1371/journal.pcbi.1004006
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| 22) | Joshi, M., Kulkarni, A., Pal, J.K. (2013). Small molecule modulators of eukaryotic initiation factor 2α kinases, the key regulators of protein synthesis. Biochimie,
95 (11), 1980-1990. Google Scholar Citations,
ISSN(print/online): 0300-9084/1638-6183,
URL/DOI: http://dx.doi.org/10.1016/j.biochi.2013.07.030
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| 23) | Mallipeddi, P.L., Joshi, M.S., Briggs, J.M. (2012). Pharmacophore-based virtual screening to aid in the identification of unknown protein function. Chemical Biology and Drug Design,
80 (6), 828-842. Google Scholar Citations,
ISSN(print/online): 1747-0277/1747-0285,
URL/DOI: http://dx.doi.org/10.1111/j.1747-0285.2012.01408.x
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Publications Before 2011 |
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| 24) | Joshi, M., Ebalunode, J.O., Briggs, J.M. (2009). Computational insights into the interaction of the anthrax lethal factor with the N-terminal region of its substrates. Proteins: Structure, Function and Bioinformatics,
75 (2), 323-335. Google Scholar Citations,
ISSN(print/online): 0887-3585/1097-0134,
URL/DOI: http://dx.doi.org/10.1002/prot.22241
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| 25) | Kulkarni-Kale, U., Bhosle, S.G., Manjari, G.S., Joshi, M., Bansode, S., Kolaskar, A.S. (2006). Curation of viral genomes: challenges, applications and the way forward. BMC Bioinformatics,
7 (5), 1-21. Google Scholar Citations,
ISSN(print/online): 1471-2105,
URL/DOI: http://dx.doi.org/10.1186/1471-2105-7-S5-S12
|