Teacher Details

Payel Ghosh

Bioinformatics Centre


1)    Lokhande, K.B., Pawar, S.V., Madkaiker, S., Nawani, N., Venkateswara, S.K., Ghosh, P. (2023). High throughput virtual screening and molecular dynamics simulation analysis of phytomolecules against BfmR of Acinetobacter baumannii: anti-virulent drug development campaign. Journal of Biomolecular Structure and Dynamics, 41 (7), 2698-2712. WoS Citations: 5, ISSN(print/online): 0739-1102/1538-0254, URL/DOI: http://dx.doi.org/10.1080/07391102.2022.2038271
2)    Chand, K., Barman, M.K., Ghosh, P., Mitra, D. (2023). DNAJB8 facilitates autophagic-lysosomal degradation of viral Vif protein and restricts HIV-1 virion infectivity by rescuing APOBEC3G expression in host cells. FASEB Journal, 37 (3), 1-23. ISSN(print/online): 0892-6638/1530-6860, URL/DOI: http://dx.doi.org/10.1096/fj.202201738R
3)    Lokhande, K.B., Pawar, S.V., Madkaiker, S., Shrivastava, A., Venkateswara, S.K., Nawani, N., Wani, M., Ghosh, P.D., Singh, A. (2023). Screening of potential phytomolecules against MurG as drug target in nosocomial pathogen Pseudomonas aeruginosa: perceptions from computational campaign. Journal of Biomolecular Structure and Dynamics, 1-14. ISSN(print/online): 0739-1102/1538-0254, URL/DOI: http://dx.doi.org/10.1080/07391102.2023.2194005
4)    Lokhande, K.B., Banerjee, T., Swamy, K.V., Ghosh, P., Deshpande, M. (2022). An in silico scientific basis for LL-37 as a therapeutic for Covid-19. Proteins: Structure, Function and Bioinformatics, 90 (5), 1029-1043. Google Scholar Citations: 1, WoS Citations: 6, ISSN(print/online): 0887-3585/1097-0134, URL/DOI: http://dx.doi.org/10.1002/prot.26198
5)    Lokhande, K.B., Ghosh, P., Nagar, S., Venkateswara Swamy, K. (2022). Novel B, C-ring truncated deguelin derivatives reveals as potential inhibitors of cyclin D1 and cyclin E using molecular docking and molecular dynamic simulation. Molecular Diversity, 26 (4), 2295–2309. WoS Citations: 3, ISSN(print/online): 1381-1991/1573-501X, URL/DOI: http://dx.doi.org/10.1007/s11030-021-10334-z
6)    Joshi, S., Ghosh, P., Barage, S., Basu, B., Deobagkar, D.D. (2022). Genome-wide lone strand adenine methylation in Deinococcus radiodurans R1: Regulation of gene expression through DR0643-dependent adenine methylation. Microbiological Research, 257, 126964. ISSN(print/online): 0944-5013/1618-0623, URL/DOI: http://dx.doi.org/10.1016/j.micres.2022.126964
7)    Kamble, R.P., Ghosh, P., Kulkarni, A.A. (2022). Identification of α-amylase inhibitory compounds from leaves of Careya arborea Roxb. and in silico docking studies. South African Journal of Botany, 151, 493-503. ISSN(print/online): 0254-6299/1727-9321, URL/DOI: http://dx.doi.org/10.1016/j.sajb.2022.05.018
8)    Doiphode, S., Lokhande, K.B., Ghosh, P., Swamy, K.V., Nagar, S. (2022). Dual inhibition of cyclooxygenase-2 (COX-2) and 5-lipoxygenase (5-LOX) by resveratrol derivatives in cancer therapy: in silico approach. Journal of Biomolecular Structure and Dynamics, 1-16. ISSN(print/online): 0739-1102/1538-0254, URL/DOI: http://dx.doi.org/10.1080/07391102.2022.2135599
9)    Ballav, S., Lokhande, K.B., Yadav, R.S., Ghosh, P.D., Swamy, K.V., Basu, S. (2022). Exploring binding mode assessment of novel kaempferol, resveratrol, and quercetin derivatives with PPAR-α as potent drug candidates against canc. Molecular Diversity, 1-19. ISSN(print/online): 1381-1991/1573-501X, URL/DOI: http://dx.doi.org/10.1007/s11030-022-10587-2
10)    Joshi, S., Ujaoney, A.K., Ghosh, P., Deobagkar, D.D., Basu, B. (2021). N6-methyladenine and epigenetic immunity of Deinococcus radiodurans. Research in Microbiology, 172 (1), 103789. WoS Citations: 3, ISSN(print/online): 0923-2508, URL/DOI: http://dx.doi.org/10.1016/j.resmic.2020.10.004
11)    Roy, A., Behera, S., Kumari, B., Mazire, P.H., Mandal, A., Purkait, B., Ghosh, P., Das, P., Das, P. (2021). The HIV − 1 protease inhibitor Amprenavir targets Leishmania donovani topoisomerase I and induces oxidative stress-mediated programmed cell death. Parasitology International, 82, 102287. WoS Citations: 2, ISSN(print/online): 1383-5769/1873-0329, URL/DOI: http://dx.doi.org/10.1016/j.parint.2021.102287
12)    Bhattacharjee, S., Laru, S., Ghosh, P., Hajra, A. (2021). Potassium Persulfate Mediated Chemodivergent C-3 Functionalization of 2H-Indazoles with DMSO as C1 Source. The Journal of Organic Chemistry, 86 (15), 10866−10873. Google Scholar Citations: 9, ISSN(print/online): 0022-3263/1520-6904, URL/DOI: http://dx.doi.org/10.1021/acs.joc.1c01188
13)    Ghosh, P., Hajra, A. (2021). Fluorination of 2 H-Indazoles Using N-Fluorobenzenesulfonimide. The Journal of Organic Chemistry, 86 (15), 10883–10888. Google Scholar Citations: 6, ISSN(print/online): 0022-3263/1520-6904, URL/DOI: http://dx.doi.org/10.1021/acs.joc.1c01253
14)    Gawade, P., Gunjal, G., Sharma, A., Ghosh, P. (2020). Reconstruction of transcriptional regulatory networks of Fis and H-NS in Escherichia coli from genome-wide data analysis. Genomics, 112 (2), 1264-1272. WoS Citations: 6, ISSN(print/online): 0888-7543/1089-8646, URL/DOI: http://dx.doi.org/10.1016/j.ygeno.2019.07.013
15)    Datir, S., Ghosh, P. (2020). In silico analysis of the structural diversity and interactions between invertases and invertase inhibitors from potato (Solanum tuberosum L.). 3 Biotech, 10 (4), 1-15. WoS Citations: 2, ISSN(print/online): 2190-572X/2190-5738, URL/DOI: http://dx.doi.org/10.1007/s13205-020-02171-y
16)    Trivedi, J., Ghosh, P., Mitra, D. (2020). N-p-Tosyl-L-phenylalanine chloromethyl ketone (TPCK) inhibits HIV-1 by suppressing the activity of viral protease. Biochemical and Biophysical Research Communications, 527 (1), 167-172. WoS Citations: 1, ISSN(print/online): 0006-291X, URL/DOI: http://dx.doi.org/10.1016/j.bbrc.2020.04.096
17)    Joshi, S.R., Jagtap, S., Basu, B., Deobagkar, D.D., Ghosh, P. (2020). Construction, analysis and validation of co-expression network to understand stress adaptation in Deinococcus radiodurans R1. PloS One, 15 (6), e0234721. WoS Citations: 2, ISSN(print/online): 1932-6203, URL/DOI: http://dx.doi.org/10.1371/journal.pone.0234721
18)    Ghosh, A.K., Ghosh, P., Hajra, A. (2020). Rhodium-Catalyzed Directed C(sp2)–H Bond Addition of 2-Arylindazoles to N-Sulfonylformaldimines and Activated Aldehydes. The Journal of Organic Chemistry, 85 (23), 15752–15759. Google Scholar Citations: 13, ISSN(print/online): 0022-3263/1520-6904, URL/DOI: http://dx.doi.org/10.1021/acs.joc.0c02408
19)    Panwar, H.S., Ojha, H., Ghosh, P., Barage, S.H., Raut, S., Sahu, A. (2019). Molecular engineering of an efficient four-domain DAF-MCP chimera reveals the presence of functional modularity in RCA proteins. Proceedings of the National Academy of Sciences of the United States of America, 116 (20), 9953-9958. WoS Citations: 5, ISSN(print/online): 1091-6490, URL/DOI: http://dx.doi.org/10.1073/pnas.1818573116
20)    Ojha, H., Ghosh, P., Panwar, H.S., Shende, R., Gondane, A., Mande, S.C., Sahu, A. (2019). Spatially conserved motifs in complement control protein domains determine functionality in regulators of complement activation-family proteins. Communications Biology, 2 (1), 290. WoS Citations: 7, ISSN(print/online): 2399-3642, URL/DOI: http://dx.doi.org/10.1038/s42003-019-0529-9
21)    De Majumdar, S., Sikri, K., Ghosh, P., Jaisinghani, N., Nandi, M., Gandotra, S., Mande, S., Tyagi, J.S. (2019). Genome analysis identifies a spontaneous nonsense mutation in ppsD leading to attenuation of virulence in laboratory-manipulated Mycobacterium tuberculosis. BMC Genomics, 20 (1), 129. Google Scholar Citations: 1, WoS Citations: 3, ISSN(print/online): 1471-2164, URL/DOI: http://dx.doi.org/10.1186/s12864-019-5482-y
22)    Gawade, P., Ghosh, P. (2018). Genomics driven approach for identification of novel therapeutic targets in Salmonella enterica. Gene, 668, 211-220. WoS Citations: 8, ISSN(print/online): 0378-1119/1879-0038, URL/DOI: http://dx.doi.org/10.1016/j.gene.2018.05.058
23)    Tembe, S., Ghosh, P., Sukhi, S. (2018). Influence of methylation on the bacterial efflux pump-inducing property of triclosan. Journal of Hospital Infection, 98 (2), 172-174. Google Scholar Citations: 1, ISSN(print/online): 0195-6701/1532-2939, URL/DOI: http://dx.doi.org/10.1016/j.jhin.2017.07.009
24)    Augustine, T., Chaudhary, P., Gupta, K., Islam, S., Ghosh, P., Santra, M.K., Mitra, D. (2017). Cyclin F/FBXO1 interacts with HIV-1 viral infectivity factor (Vif) and restricts progeny virion infectivity by ubiquitination and proteasomal degradation of vif protein through SCFcyclin F E3 ligase machinery. Journal of Biological Chemistry, 292 (13), 5349-5363. Google Scholar Citations: 2, WoS Citations: 14, ISSN(print/online): 0021-9258/1083-351X, URL/DOI: http://dx.doi.org/10.1074/jbc.M116.765842
25)    Panwar, H.S., Ojha, H., Ghosh, P., Raut, S., Sahu, A. (2016). Domain swapping reveals functional modularity present in the decay-accelerating factor (CD55). Immunobiology, 10 (221), 1181-1182. ISSN(print/online): 0171-2985/1878-3279, URL/DOI: http://dx.doi.org/10.1016/j.imbio.2016.06.128
26)    Gautam, A.K., Panse, Y., Ghosh, P., Reza, M.J., Mullick, J., Sahu, A. (2015). Mutational analysis of Kaposica reveals that bridging of MG2 and CUB domains of target protein is crucial for the cofactor activity of RCA proteins. Proceedings of the National Academy of Sciences of the United States of America, 112 (41), 12794-12799. Google Scholar Citations: 6, WoS Citations: 11, ISSN(print/online): 1091-6490, URL/DOI: http://dx.doi.org/10.1073/pnas.1506449112
27)    Banerjee, A., Benjamin, R., Balakrishnan, K., Ghosh, P., Banerjee, S. (2014). Human protein Staufen-2 promotes HIV-1 proliferation by positively regulating RNA export activity of viral protein Rev. Retrovirology, 11 (1), 1. Google Scholar Citations: 10, WoS Citations: 17, ISSN(print/online): 1742-4690, URL/DOI: http://dx.doi.org/10.1186/1742-4690-11-18
28)    Ghosh, P., Bagchi, M.C. (2011). Anti-tubercular drug designing by structure based screening of combinatorial libraries. Journal of Molecular Modeling, 17 (7), 1607-1620. Google Scholar Citations: 14, WoS Citations: 16, ISSN(print/online): 1610-2940/0948-5023, URL/DOI: http://dx.doi.org/10.1007/s00894-010-0861-y