Teacher Details
Payel Ghosh
Bioinformatics Centre
payelghosh@gmail.com
| 1) | Dasgupta, A., Tripathi, A., Mitra, A., Ghosh, P., Santra, M.K., Mitra, D. (2025). Human microRNA miR-197-3p positively regulates HIV-1 virion infectivity through its target DDX52 by stabilizing Vif protein expression. Journal of Biological Chemistry,
301 (2), 108198.
ISSN(print/online): 0021-9258/1083-351X,
URL/DOI: http://dx.doi.org/10.1016/j.jbc.2025.108198
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| 2) | Lokhande, K.B., Pawar, S.V., Madkaiker, S., Shrivastava, A., Venkateswara, S.K., Nawani, N., Wani, M., Ghosh, P.D., Singh, A. (2024). Screening of potential phytomolecules against MurG as drug target in nosocomial pathogen Pseudomonas aeruginosa: perceptions from computational campaign. Journal of Biomolecular Structure and Dynamics,
42 (1), 1-14.
ISSN(print/online): 0739-1102/1538-0254,
URL/DOI: http://dx.doi.org/10.1080/07391102.2023.2194005
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| 3) | Singh, S., Ghosh, P., Sharma, S., Bhargava, S., Kumar, A.R. (2024). Tetrahydropalmatine from medicinal plants activates human glucokinase to regulate glucose homeostasis. Biotechnology and Applied Biochemistry,
71 (2), 295-313.
ISSN(print/online): 0885-4513/1470-8744,
URL/DOI: http://dx.doi.org/10.1002/bab.2541
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| 4) | Kamble, S.C., Ghosh, P.D. (2024). Defining omics-based biomarker signatures of metabolic dysfunction-associated steatotic liver disease (MASLD): In vitro studies. Current Opinion in Biomedical Engineering,
30, 100534.
ISSN(print/online): 2468-4511,
URL/DOI: http://dx.doi.org/10.1016/j.cobme.2024.100534
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| 5) | Lokhande, K.B., Pawar, S.V., Madkaiker, S., Nawani, N., Venkateswara, S.K., Ghosh, P. (2023). High throughput virtual screening and molecular dynamics simulation analysis of phytomolecules against BfmR of Acinetobacter baumannii: anti-virulent drug development campaign. Journal of Biomolecular Structure and Dynamics,
41 (7), 2698-2712.
ISSN(print/online): 0739-1102/1538-0254,
URL/DOI: http://dx.doi.org/10.1080/07391102.2022.2038271
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| 6) | Doiphode, S., Lokhande, K.B., Ghosh, P., Swamy, K.V., Nagar, S. (2023). Dual inhibition of cyclooxygenase-2 (COX-2) and 5-lipoxygenase (5-LOX) by resveratrol derivatives in cancer therapy: in silico approach. Journal of Biomolecular Structure and Dynamics,
41 (17), 8571-8586. Google Scholar Citations,
ISSN(print/online): 0739-1102/1538-0254,
URL/DOI: http://dx.doi.org/10.1080/07391102.2022.2135599
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| 7) | Ballav, S., Lokhande, K.B., Yadav, R.S., Ghosh, P.D., Swamy, K.V., Basu, S. (2023). Exploring binding mode assessment of novel kaempferol, resveratrol, and quercetin derivatives with PPAR-α as potent drug candidates against canc. Molecular Diversity,
27 (6), 2867 - 2885.
ISSN(print/online): 1381-1991/1573-501X,
URL/DOI: http://dx.doi.org/10.1007/s11030-022-10587-2
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| 8) | Chand, K., Barman, M.K., Ghosh, P., Mitra, D. (2023). DNAJB8 facilitates autophagic-lysosomal degradation of viral Vif protein and restricts HIV-1 virion infectivity by rescuing APOBEC3G expression in host cells. FASEB Journal,
37 (3), 1-23.
ISSN(print/online): 0892-6638/1530-6860,
URL/DOI: http://dx.doi.org/10.1096/fj.202201738R
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| 9) | Lokhande, K.B., Banerjee, T., Swamy, K.V., Ghosh, P., Deshpande, M. (2022). An in silico scientific basis for LL-37 as a therapeutic for Covid-19. Proteins: Structure, Function and Bioinformatics,
90 (5), 1029-1043. Google Scholar Citations,
ISSN(print/online): 0887-3585/1097-0134,
URL/DOI: http://dx.doi.org/10.1002/prot.26198
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| 10) | Lokhande, K.B., Ghosh, P., Nagar, S., Venkateswara Swamy, K. (2022). Novel B, C-ring truncated deguelin derivatives reveals as potential inhibitors of cyclin D1 and cyclin E using molecular docking and molecular dynamic simulation. Molecular Diversity,
26 (4), 2295–2309.
ISSN(print/online): 1381-1991/1573-501X,
URL/DOI: http://dx.doi.org/10.1007/s11030-021-10334-z
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| 11) | Joshi, S., Ghosh, P., Barage, S., Basu, B., Deobagkar, D.D. (2022). Genome-wide lone strand adenine methylation in Deinococcus radiodurans R1: Regulation of gene expression through DR0643-dependent adenine methylation. Microbiological Research,
257, 126964.
ISSN(print/online): 0944-5013/1618-0623,
URL/DOI: http://dx.doi.org/10.1016/j.micres.2022.126964
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| 12) | Kamble, R.P., Ghosh, P., Kulkarni, A.A. (2022). Identification of α-amylase inhibitory compounds from leaves of Careya arborea Roxb. and in silico docking studies. South African Journal of Botany,
151, 493-503.
ISSN(print/online): 0254-6299/1727-9321,
URL/DOI: http://dx.doi.org/10.1016/j.sajb.2022.05.018
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| 13) | Joshi, S., Ujaoney, A.K., Ghosh, P., Deobagkar, D.D., Basu, B. (2021). N6-methyladenine and epigenetic immunity of Deinococcus radiodurans. Research in Microbiology,
172 (1), 103789.
ISSN(print/online): 0923-2508/1769-7123,
URL/DOI: http://dx.doi.org/10.1016/j.resmic.2020.10.004
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| 14) | Roy, A., Behera, S., Kumari, B., Mazire, P.H., Mandal, A., Purkait, B., Ghosh, P., Das, P., Das, P. (2021). The HIV − 1 protease inhibitor Amprenavir targets Leishmania donovani topoisomerase I and induces oxidative stress-mediated programmed cell death. Parasitology International,
82, 102287.
ISSN(print/online): 1383-5769/1873-0329,
URL/DOI: http://dx.doi.org/10.1016/j.parint.2021.102287
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| 15) | Ghosh, P., Hajra, A. (2021). Fluorination of 2 H-Indazoles Using N-Fluorobenzenesulfonimide. The Journal of Organic Chemistry,
86 (15), 10883–10888. Google Scholar Citations,
ISSN(print/online): 0022-3263/1520-6904,
URL/DOI: http://dx.doi.org/10.1021/acs.joc.1c01253
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| 16) | Gawade, P., Gunjal, G., Sharma, A., Ghosh, P. (2020). Reconstruction of transcriptional regulatory networks of Fis and H-NS in Escherichia coli from genome-wide data analysis. Genomics,
112 (2), 1264-1272.
ISSN(print/online): 0888-7543/1089-8646,
URL/DOI: http://dx.doi.org/10.1016/j.ygeno.2019.07.013
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| 17) | Datir, S., Ghosh, P. (2020). In silico analysis of the structural diversity and interactions between invertases and invertase inhibitors from potato (Solanum tuberosum L.). 3 Biotech,
10 (4), 1-15.
ISSN(print/online): 2190-572X/2190-5738,
URL/DOI: http://dx.doi.org/10.1007/s13205-020-02171-y
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| 18) | Trivedi, J., Ghosh, P., Mitra, D. (2020). N-p-Tosyl-L-phenylalanine chloromethyl ketone (TPCK) inhibits HIV-1 by suppressing the activity of viral protease. Biochemical and Biophysical Research Communications,
527 (1), 167-172.
ISSN(print/online): 0006-291X/1090-2104,
URL/DOI: http://dx.doi.org/10.1016/j.bbrc.2020.04.096
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| 19) | Joshi, S.R., Jagtap, S., Basu, B., Deobagkar, D.D., Ghosh, P. (2020). Construction, analysis and validation of co-expression network to understand stress adaptation in Deinococcus radiodurans R1. PloS One,
15 (6), e0234721.
ISSN(print/online): 1932-6203,
URL/DOI: http://dx.doi.org/10.1371/journal.pone.0234721
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| 20) | Panwar, H.S., Ojha, H., Ghosh, P., Barage, S.H., Raut, S., Sahu, A. (2019). Molecular engineering of an efficient four-domain DAF-MCP chimera reveals the presence of functional modularity in RCA proteins. Proceedings of the National Academy of Sciences of the United States of America,
116 (20), 9953-9958.
ISSN(print/online): 1091-6490,
URL/DOI: http://dx.doi.org/10.1073/pnas.1818573116
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| 21) | Ojha, H., Ghosh, P., Panwar, H.S., Shende, R., Gondane, A., Mande, S.C., Sahu, A. (2019). Spatially conserved motifs in complement control protein domains determine functionality in regulators of complement activation-family proteins. Communications Biology,
2 (1), 290.
ISSN(print/online): 2399-3642,
URL/DOI: http://dx.doi.org/10.1038/s42003-019-0529-9
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| 22) | De Majumdar, S., Sikri, K., Ghosh, P., Jaisinghani, N., Nandi, M., Gandotra, S., Mande, S., Tyagi, J.S. (2019). Genome analysis identifies a spontaneous nonsense mutation in ppsD leading to attenuation of virulence in laboratory-manipulated Mycobacterium tuberculosis. BMC Genomics,
20 (1), 129. Google Scholar Citations,
ISSN(print/online): 1471-2164,
URL/DOI: http://dx.doi.org/10.1186/s12864-019-5482-y
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| 23) | Gawade, P., Ghosh, P. (2018). Genomics driven approach for identification of novel therapeutic targets in Salmonella enterica. Gene,
668, 211-220.
ISSN(print/online): 0378-1119/1879-0038,
URL/DOI: http://dx.doi.org/10.1016/j.gene.2018.05.058
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| 24) | Tembe, S., Ghosh, P., Sukhi, S. (2018). Influence of methylation on the bacterial efflux pump-inducing property of triclosan. Journal of Hospital Infection,
98 (2), 172-174. Google Scholar Citations,
ISSN(print/online): 0195-6701/1532-2939,
URL/DOI: http://dx.doi.org/10.1016/j.jhin.2017.07.009
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| 25) | Augustine, T., Chaudhary, P., Gupta, K., Islam, S., Ghosh, P., Santra, M.K., Mitra, D. (2017). Cyclin F/FBXO1 interacts with HIV-1 viral infectivity factor (Vif) and restricts progeny virion infectivity by ubiquitination and proteasomal degradation of vif protein through SCFcyclin F E3 ligase machinery. Journal of Biological Chemistry,
292 (13), 5349-5363. Google Scholar Citations,
ISSN(print/online): 0021-9258/1083-351X,
URL/DOI: http://dx.doi.org/10.1074/jbc.M116.765842
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| 26) | Panwar, H.S., Ojha, H., Ghosh, P., Raut, S., Sahu, A. (2016). Domain swapping reveals functional modularity present in the decay-accelerating factor (CD55). Immunobiology,
10 (221), 1181-1182.
ISSN(print/online): 0171-2985/1878-3279,
URL/DOI: http://dx.doi.org/10.1016/j.imbio.2016.06.128
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| 27) | Gautam, A.K., Panse, Y., Ghosh, P., Reza, M.J., Mullick, J., Sahu, A. (2015). Mutational analysis of Kaposica reveals that bridging of MG2 and CUB domains of target protein is crucial for the cofactor activity of RCA proteins. Proceedings of the National Academy of Sciences of the United States of America,
112 (41), 12794-12799. Google Scholar Citations,
ISSN(print/online): 1091-6490,
URL/DOI: http://dx.doi.org/10.1073/pnas.1506449112
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| 28) | Banerjee, A., Benjamin, R., Balakrishnan, K., Ghosh, P., Banerjee, S. (2014). Human protein Staufen-2 promotes HIV-1 proliferation by positively regulating RNA export activity of viral protein Rev. Retrovirology,
11 (1), 1. Google Scholar Citations,
ISSN(print/online): 1742-4690,
URL/DOI: http://dx.doi.org/10.1186/1742-4690-11-18
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| 29) | Ghosh, P., Bagchi, M.C. (2011). Anti-tubercular drug designing by structure based screening of combinatorial libraries. Journal of Molecular Modeling,
17 (7), 1607-1620. Google Scholar Citations,
ISSN(print/online): 1610-2940/0948-5023,
URL/DOI: http://dx.doi.org/10.1007/s00894-010-0861-y
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